PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001830.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 351aa    MW: 39216.2 Da    PI: 6.7941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001830.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14160206354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  PCP001830.1 160 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 206
                  79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MMCGKEEDQG ECSQSVQNLQ AFQEHLFLQQ QQHHQMQQHQ QGGLIFPHDH QPPPPTPILQ  60
PWTLPPIYNP TAHDPFLLPT PPQIPSSSSY ASFFNRRPPS LQFTYDGSAS DHHHHHHLRI  120
LSETLGPMVQ PGSGAFGLQA ELGKLTAQEI MDAKALAASK SHSEAERRRR ERINNHLAKL  180
RSLLPSTTKT DKASLLAEVI QHVKELKRQT SLIAETSPVP TETDELLLDD ASDEDGKFVI  240
KASLCCEDRS DLLPDLIKTL KSLRLRTLKA EITTLGGRVK NVLFITGEED WSSSGGEQVQ  300
MQHQQYCKSS IQEALKAVME KTGCGDQDQS STGSAKRQRT NNINILEHRS L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-82bHLH family protein