PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001899.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 254aa    MW: 27917.2 Da    PI: 8.9622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001899.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.4e-152776355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  PCP001899.1 27 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 76
                 9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MKNMTRQEYV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  60
EEAAEAYDIA AIKFRGLNAV TNFDITRYDV DRIMSSNTLL AGELAKRNKE VVPINEATNE  120
TNVSQIGNGE AVVPLKNISE GEDWKMALYQ PSQHLDQKQP STETQNVIQA EAGDSTKMGN  180
AHFSNASSLV TSLGSSREAS PDKSCQPSFF GMPPSASKFF TSSSDAVSSW IPTVQSRPGL  240
TIPHMPIFAA WTDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.14e-66AP2 family protein