PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001922.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 516aa    MW: 56886.9 Da    PI: 6.9408
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001922.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.56.1e-28228282156
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  k +++WtpeLH+rFv+aveqL G +kA+P++ilelm+v++Lt+++++SHLQkYR++
  PCP001922.1 228 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGVDCLTRHNIASHLQKYRSH 282
                  5689*****************.********************************86 PP
2Myb_DNA-binding39.21.6e-12231280248
                      SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                        WT+e++ ++v+av+qlG +   +++I + mg   +t+ ++ s++qky+
      PCP001922.1 231 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGvDCLTRHNIASHLQKYR 280
                      57********************************889************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MLLLSPLTEG RHHHQLKDEK QLGDDGDVES SFAFNGGNNT VLDFPEFSGG MGMGNLLDSI  60
DFDDLFIGIH DGDVLPDLEM DSEILDFSVP APADDINTKT TPPPPSKEEE EVADDYYNTT  120
KTTTTSSKVE DQEEEDLHGH GEVAAAAVSI TSTNNNSGLN QNYSSSSTTT TPDNRGDQEI  180
VSKRDDINQI RAACRPSSGS TRRKSADHKL ATKSSPTAQS KKSHGKRKVK VDWTPELHRR  240
FVQAVEQLGV DKAVPSRILE LMGVDCLTRH NIASHLQKYR SHRKHLLARE AEAASWTQRR  300
QMYGAAAAAG GGAGPKSRRD VMMMNNPNWL NAPTIGFPSI TSTTPPPMHH AQHHRQLIRP  360
LHVWGHPTMD QSMMHMWPPK HHLPHHFPPP VLPPPPPAPA HAWPPGPPPP PDASYWHHPH  420
SHHQRQRFHT PPVPGIPPHA MYKVEPARIA APTPPQSGPH LLLDFHPSKE SIDAAIGDVL  480
SKPWLPLPLG LRPPTTDTVM VELQRQGVQK FPPSCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20570.13e-73G2-like family protein