PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001947.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 349aa    MW: 38047.1 Da    PI: 10.2963
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001947.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-14100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + k+lG+g+W+ Iar + ++Rt+ q+ s+ qky
      PCP001947.1 100 PWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MVKESARKCS HCGHNGHNSR TCNHGHGNKG VCLKLFGVNI MEKEEDSIKK SYSMGNLLAD  60
GTGDHNNNAV VADHDAGYLS DGLIHNKRHK AAHERKKGRP WTEEEHRVFL AGLKKLGKGD  120
WRGIARNFVT TRTPTQVASH AQKYFLRQAT NDKRKRRSSL FDMHFKELSD QGPQDSSISP  180
TKSADETSPQ ASSSKTMPLK INTANNSPPA SNVPTRILNR FPHLCLDSPP APPLSPTCTL  240
PNYPAMPFMM RIPANVPYAP MTHFYRPSYH HMIKNHGNFP TCAPVISHPS GIPSSPRSLP  300
SSPSMAAGRI SSMTSAAEKD ALELKIGPPQ PSQGASLSPP SSSGAIRVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-69MYB_related family protein