PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001952.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 299aa    MW: 33220.2 Da    PI: 6.0515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001952.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-20132182255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka++ a+ +l+g
  PCP001952.1 132 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAVEAAKAYDVAAFNLRG 182
                  7********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MASEASALEL IGQHLLNEFT TMDSFIASLD LCTSVPQQDE IAQSPFTNGG SESTDQYFKI  60
SDYLVPEIDQ DTQFETKPQI SHPKPPKHST LSHRKPPINV TIPSPPPLSS SSADEDQNTS  120
NTSTMVEAAA RHYRGVRRRP WGKYAAEIRD PNRRGSRVWL GTFDTAVEAA KAYDVAAFNL  180
RGSKAILNFP LEAGRSAELP ADHPLLASRK RRREHSTEIH ENSGEMIRNK EIKKEEDVQE  240
MKNSAQERVS TAVCPLTPSS WAAVWDMSKE TEQGIFSVPP LSPLSPHPNF LGYPPLMVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209213RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-45ERF family protein