PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001953.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 221aa    MW: 24828.6 Da    PI: 6.2576
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001953.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-17119169255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp     k +r++lg+f+t  +Aaka++ a+ kl+g
  PCP001953.1 119 HYRGVRRRP-WGKFAAEIRDP---ArKGTRVWLGTFDTDVDAAKAYDCAAFKLRG 169
                  7********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MPAHEEQDDS TLELIRQYLL GDFTFTDSFI SHLNFQFQPV KPEYSSLSES GPSSPISNPN  60
HHSPHFSTSE TKPEIVNLPS MEAEPLNLSS PKRKNSTSQN PGPKDELQQV SGPGDALRHY  120
RGVRRRPWGK FAAEIRDPAR KGTRVWLGTF DTDVDAAKAY DCAAFKLRGR KAILNFPLEA  180
GVSEPPVNTA RKRRRSVKQE EVAETEELEL QSWVLWEGEG A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191195RKRRR
2191196RKRRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-44ERF family protein