PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001998.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 222aa    MW: 24869.6 Da    PI: 8.6053
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001998.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.8e-163281255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ +eeAa a+++a++ l+g
  PCP001998.1 32 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDREEEAALAYDKAARLLRG 81
                 577******.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDSSSMSQPI QTQTFQENKE KNTRKGSKNG KRFLGVRQRP SGRWVAEIKD SSQKLRLWLG  60
TFDREEEAAL AYDKAARLLR GRNAKTNFPS CHILNTHEEN CSILRKNPRL SQLLQHAIMK  120
NHARSSSLNS VSSAKANLWD RSQMRGIDFD TLVEETIVCS SSGAATSGQD HGDHDEDRNN  180
KLCALSFGSC KVYSSVVVAP SFSSSSQCQQ AHNEEEKDYQ EA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-27ERF family protein