PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002016.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 193aa    MW: 21934.9 Da    PI: 9.6818
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.77e-2728117190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  kfY +YA++vGF vr+ + ++s  +g++  r++ C+k+g++ ++  k   e+++r++ r gCka++ vk+ek+gkw+vt+++++HnH+l+
  PCP002016.1  28 KFYTDYARQVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQPGKFGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 117
                  6*******************************************9999****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MDVGTSGGGL VPEPYVGMEF DSEDAARKFY TDYARQVGFV VRVMQRRRSG IDGRTLARRL  60
GCNKQGFSPN QPGKFGPEKK PRPSAREGCK ATILVKMEKS GKWVVTRFVK DHNHPLVVTA  120
NGFSTEGDKD RKIEELTMEL EHQDQRCAAY REKLLSFMHN VEAETEELSG KIQAIVENVR  180
KVESEMQKHS FRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.12e-75FAR1 family protein