PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002090.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 217aa    MW: 23345.8 Da    PI: 5.6675
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002090.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.2e-13164209655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k  + a++L +AveY+k Lq
  PCP002090.1 164 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 209
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MQRAAGGSSG GEVSRGGGGL GRFSSAPATW LEALLEEDEE DPLKPTQCLT ELLADNTPCT  60
TVDPALYEAA DGYLSRQHSS PADFNVGGGG SGGYFSGFGI PGHLDLASSS SLSPNSSSSS  120
ANKRVREQHQ FSSDSHVKVE EGGLEDSVSC RVRAKRGCAT HPRSIAERVR RTRISDRIRK  180
LQELVPNMDK QTNTADMLDE AVEYVKFLQK QIQVLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-37bHLH family protein