PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002457.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 237aa    MW: 26060.3 Da    PI: 8.92
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002457.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000264668123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C+ C++ F++   L  H+++H
  PCP002457.1 46 YACSFCKREFRSAQALGGHMNVH 68
                 89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEKKSLVSNS LKDHAGIVTR TIRSSKTTYE EEDYNIDGFS WPPRSYACSF CKREFRSAQA  60
LGGHMNVHRR DRARLKGSSP RDGQHASTIL NLNLNKVPNP NPNFSSTPSP TSPSSLISPF  120
SSTLPSLVSP SAPPSPTFLV SSSENMKWVV GDTIFNHPLN LKGSDLGTKV KKSAKSFCEV  180
GDRQRDGFIG EEEHGCIKTF KAADHPHHPI LRLGLEIGLP GDSNKEDLDL ELRLGYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-23C2H2 family protein