PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002459.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 432aa MW: 47296.2 Da PI: 6.8579

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002459.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.4e-12	367	411	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++Er RR ri +++ +L+el+P+ +k + +++L +AveYIk+L PCP002459.1 367 SIAERVRRTRISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKDL 411 689*******************7....688*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MESDLQQHHK PQQHMNSGLM RYRSAPSSYF TNILDSELYE PFLNRPSSPE TERILSRFLA 60 SEGGGNGGGG GGGGEGTEQI ASQHKVATQV NNQQPQFLVP KVDDEMEVIQ QHQQQQQQQQ 120 QQQQQSNLNN YSSVAQGFYQ SPAAKPPLPN QNLTSANEGA YSMRGSHLPP MKTGGGVANS 180 NLIRHSSSPA GWFSNVNIDG YAALRGMGNF GARDSTNEEA SFSPASRLKN FSSVPPSTSG 240 LISPISEIGN KRMRSNSQDA GAFGDDRGNN YVTGFPMDSW DDSAILGDDI SGSTGFRDDD 300 VKAYTGLSPS ETQDVEAGSR PPTLLAHHLS LPKTATEMAA IEKFLQLQDS VPCKIRAKRG 360 CATHPRSIAE RVRRTRISER MRKLQELVPN MDKQTNTSDM LDLAVEYIKD LKTQVQTLSE 420 NRAKCTCSNK QQ

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MESDLQQHHK PQQHMNSGLM RYRSAPSSYF TNILDSELYE PFLNRPSSPE TERILSRFLA  60
SEGGGNGGGG GGGGEGTEQI ASQHKVATQV NNQQPQFLVP KVDDEMEVIQ QHQQQQQQQQ  120
QQQQQSNLNN YSSVAQGFYQ SPAAKPPLPN QNLTSANEGA YSMRGSHLPP MKTGGGVANS  180
NLIRHSSSPA GWFSNVNIDG YAALRGMGNF GARDSTNEEA SFSPASRLKN FSSVPPSTSG  240
LISPISEIGN KRMRSNSQDA GAFGDDRGNN YVTGFPMDSW DDSAILGDDI SGSTGFRDDD  300
VKAYTGLSPS ETQDVEAGSR PPTLLAHHLS LPKTATEMAA IEKFLQLQDS VPCKIRAKRG  360
CATHPRSIAE RVRRTRISER MRKLQELVPN MDKQTNTSDM LDLAVEYIKD LKTQVQTLSE  420
NRAKCTCSNK QQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	6e-71	bHLH family protein