PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002497.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 513aa MW: 57017.2 Da PI: 5.8771

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002497.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.1	4.3e-15	307	353	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++N +++ L++l+P++ +K++ a+iL A++YI++L PCP002497.1 307 TKHFATERQRRQQLNGKYDILKTLVPNP-----TKNDRASILGDAIDYINEL 353 78************************.....9*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MYQDTVGCNF DPNSIPDSAA ESLLDVNPLS PPPPPPPQQP QVLMPCSDTH HHNNTTTNSG 60 FGVEENIRLS IEELSYHHHR HQNHHSSMDI ELQSELGFHV DNPYGNTTDH DNNINNSHLV 120 SFEHPTNWDN NIHGVHDQMQ QQFPDGTTTA TSTLYPQPPD LLNVFSLPRC SPSSLLQNPS 180 ITFTNPIQKT SNFPSSLGSL GDLPSAVDTP QGTAFSVLYD PLFHLNLPPQ PPIFRELLQS 240 LPHGYNLPGS GNGSLFSSGG DEREESGGGV LYDPDPDGRL GRQFDSGVLE FSREMASNGR 300 GRDLKGTKHF ATERQRRQQL NGKYDILKTL VPNPTKNDRA SILGDAIDYI NELLRTVDEL 360 KLLVEKKRCG TERIKRHKTE HDGGSAGDDE TCNVKPLGEH HDQSYSNGSL RSSWLQRKSK 420 DTQVDIRIID DEVTIKLVQR KKINLLLFVS RILDELQLDL HHVAGGHIGN SYSFLFNTKM 480 YEGSCLYASA IAGKLIEVLD RQYAAAVPPT SSY

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MYQDTVGCNF DPNSIPDSAA ESLLDVNPLS PPPPPPPQQP QVLMPCSDTH HHNNTTTNSG  60
FGVEENIRLS IEELSYHHHR HQNHHSSMDI ELQSELGFHV DNPYGNTTDH DNNINNSHLV  120
SFEHPTNWDN NIHGVHDQMQ QQFPDGTTTA TSTLYPQPPD LLNVFSLPRC SPSSLLQNPS  180
ITFTNPIQKT SNFPSSLGSL GDLPSAVDTP QGTAFSVLYD PLFHLNLPPQ PPIFRELLQS  240
LPHGYNLPGS GNGSLFSSGG DEREESGGGV LYDPDPDGRL GRQFDSGVLE FSREMASNGR  300
GRDLKGTKHF ATERQRRQQL NGKYDILKTL VPNPTKNDRA SILGDAIDYI NELLRTVDEL  360
KLLVEKKRCG TERIKRHKTE HDGGSAGDDE TCNVKPLGEH HDQSYSNGSL RSSWLQRKSK  420
DTQVDIRIID DEVTIKLVQR KKINLLLFVS RILDELQLDL HHVAGGHIGN SYSFLFNTKM  480
YEGSCLYASA IAGKLIEVLD RQYAAAVPPT SSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	5e-94	bHLH family protein