PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002532.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 230aa MW: 25448.1 Da PI: 7.1177

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002532.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.5	1.5e-15	30	90	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+ +++eq+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ PCP002532.1 30 RSRWIPKPEQILILESIFNSgMVNPPKEETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 90 89***************99***********************************997 PP
2	Wus_type_Homeobox	105.1	4.5e-34	29	92	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW P+peQi iLe++++sG+++P+kee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PCP002532.1 29 VRSRWIPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 92 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MEDHHQHQGQ DPDGSSPSNG STERSPEPVR SRWIPKPEQI LILESIFNSG MVNPPKEETV 60 RIRKLLEKFG SVGDANVFYW FQNRRSRSRR RQRQLQASLE QGTNNNINSN PTASLSHHQL 120 RGEIQYGISC SVPAAAPPLA FGASPNNFLM GSSSSSSCGH HLITDHDVHH STACVDDQFF 180 PVSSQMGFPE IEQSSGVTSA LGGGPSDTSN FHFQSVFSTW FQIAFKKILQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	4e-36	WOX family protein