PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002763.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 160aa    MW: 17796.7 Da    PI: 9.0602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002763.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.2e-173281255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  PCP002763.1 32 QYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 81
                 7******99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MEGDYCCSSS SSSSTSMSME KRKHPDHHQE KQYRGIRMRK WGKWVAEIRE PNKRSRIWLG  60
SYTTPVAAAR AYDTAVFYLR GPSARLNFPE LVFQDDGQQL HDMSAASIRK KATEVGAKVD  120
AAQTALHSSP TSPSKTASGR GGSQKPDLNE YPDPENSDES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.19e-54ERF family protein