PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002930.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 196aa MW: 22008.4 Da PI: 9.9566

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002930.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.6e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeelv++yL++k+++++l + +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + PCP002930.1 14 LPPGFRFHPTDEELVNHYLCRKCASQPLAV-PIITEIDLYKFDPWHLPHMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKHIGK--PK 108 79***********************999.88***********7666789*********************************98..77 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+ p+g kt+W+mheyrl PCP002930.1 109 ALGIKKALVFYAGKPPNGIKTNWIMHEYRL 138 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MSGGGDERKQ QLELPPGFRF HPTDEELVNH YLCRKCASQP LAVPIITEID LYKFDPWHLP 60 HMALYGEKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKHIGKPKAL GIKKALVFYA 120 GKPPNGIKTN WIMHEYRLAN VDRSAAAAKK HKNLRLDDWV LCRIYNKKVT NKMTNTQVAA 180 DGGLLELLGA CAVAGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-100	NAC family protein