PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003100.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HSF
Protein Properties Length: 84aa    MW: 9259.48 Da    PI: 5.7093
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003100.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind82.46.9e-261674260
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                  Fl k+y++++d++++e++sws+n++sf+v+++ efa+ +Lp+yFkh+nf+SF+RQLn+Y
   PCP003100.1 16 FLLKTYDMVDDSATDEIVSWSSNKKSFIVWNPPEFARVLLPTYFKHNNFSSFIRQLNTY 74
                  9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MEGASTAGGG GGPAPFLLKT YDMVDDSATD EIVSWSSNKK SFIVWNPPEF ARVLLPTYFK  60
HNNFSSFIRQ LNTYVSSLPL NILT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13980.11e-30HSF family protein