PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003121.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 151aa    MW: 16902.9 Da    PI: 9.2147
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003121.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.74.8e-144441252
                 HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
     Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52
                 +++L + F++n+yp+++++e LA++lg+  +qV+ WF N R
  PCP003121.1  4 IKRLSKSFKENHYPDRSMKESLAQELGIMAKQVSKWFENAR 44
                 789************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MNIIKRLSKS FKENHYPDRS MKESLAQELG IMAKQVSKWF ENARHCLKVS VDKSAAGNGT  60
PLPQTNGKQL EQDGTTFGAQ NKELPRTDDP MTGSCSGDVK DSELVTPKSS KQKAITPNNR  120
KRERQSDDLD PENETPETNR KAPVFSPVFH M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.12e-09HB-PHD family protein