PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003272.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 321aa    MW: 34775.1 Da    PI: 10.3009
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003272.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.2e-1492136347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
      PCP003272.1  92 AWTEEEHKLFLVGLQMVGKGDWRGISRNFVKTRTPTQVASHAQKY 136
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MSRTCSQCGN NGHNSRKCTD VSGGGCGGPT TENGIMLFGV RVTEGNAFRK SVSMNNLSQC  60
GRQADTNAEA GYASDDVVHA SGHRRERRRG VAWTEEEHKL FLVGLQMVGK GDWRGISRNF  120
VKTRTPTQVA SHAQKYFLRR NNHNRRRRRS SLFDITTDTP LNSLMEEDLG ETSPSVVPVL  180
PFPPQPHSNL GCNILGGFPV STFPAALPVT GEGSPIQSKL ISSGLNMKSL QDMQQSQTKV  240
SQTTTRPIRP IPLHPPVVPP SSKLAGFNLK NKYSSSPTRD PLPLSLKLST TPSEEQSPTT  300
TSHSSTFQAM SSGTDSIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.23e-70MYB_related family protein