PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003536.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 144aa    MW: 16115.2 Da    PI: 7.4399
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003536.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB157.22.6e-49499297
        NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 +eqd +lPianv+rimk++lP +akisk+ak+t+qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++y+++   yl+kyre+e++k
  PCP003536.1  4 QEQDGMLPIANVGRIMKQILPPRAKISKEAKQTMQECATEFLSFVTGEASDKCHKENRKTVNGDDICWALSALGFDNYAQAAMRYLHKYREAERDK 99
                 69********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MVDQEQDGML PIANVGRIMK QILPPRAKIS KEAKQTMQEC ATEFLSFVTG EASDKCHKEN  60
RKTVNGDDIC WALSALGFDN YAQAAMRYLH KYREAERDKA AANNNQNTAN IASHGGLQVR  120
EQTQTSNLEF RVLEKGDNSL ITKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.11e-55NF-YB family protein