PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003670.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 368aa MW: 41265 Da PI: 8.3178

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003670.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.8	2.5e-54	5	131	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+++yL++kv++ +++ ++++ vd++k+ePwdLp k++ +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdke+ + g PCP003670.1 5 LPPGFRFHPTDEELITHYLCHKVSDASFTS-KAVAVVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIRR-VGV 100 79***********************999.88***********988999***********************************9.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfykgrap+gek++Wvmheyrle PCP003670.1 101 LVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131 ***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MQESLPPGFR FHPTDEELIT HYLCHKVSDA SFTSKAVAVV DLNKCEPWDL PGKASMGEKE 60 WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIRRVGV LVGMKKTLVF YKGRAPRGEK 120 SNWVMHEYRL ENKHPFKSSK EEWVVCRVFQ KNISALKKPQ QATTSSQKQP TNESPCDDTN 180 SIVNEFGDIE LPNLNSNINA NSSSGFSNNI SSPQSYYSNI LDHSKNNIND VTNMSLKMTW 240 AATAAREAAA NALSLPSSLL SPSNLSVNSL LLRALQLRSS TNNNGSNYQP RATNHVQATA 300 GTSTLDYSSY DHIQQGMMPS MSHHFGSSTT MDHINSNFQA SSSSTNDQMM ESMPLQHSEQ 360 PFNLDSIW

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MQESLPPGFR FHPTDEELIT HYLCHKVSDA SFTSKAVAVV DLNKCEPWDL PGKASMGEKE  60
WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIRRVGV LVGMKKTLVF YKGRAPRGEK  120
SNWVMHEYRL ENKHPFKSSK EEWVVCRVFQ KNISALKKPQ QATTSSQKQP TNESPCDDTN  180
SIVNEFGDIE LPNLNSNINA NSSSGFSNNI SSPQSYYSNI LDHSKNNIND VTNMSLKMTW  240
AATAAREAAA NALSLPSSLL SPSNLSVNSL LLRALQLRSS TNNNGSNYQP RATNHVQATA  300
GTSTLDYSSY DHIQQGMMPS MSHHFGSSTT MDHINSNFQA SSSSTNDQMM ESMPLQHSEQ  360
PFNLDSIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-104	NAC family protein