PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003972.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 422aa    MW: 46484.1 Da    PI: 4.393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003972.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194796255
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  PCP003972.1 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                 789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MARKRKVSEG VEDNSATSSE GNMGWDEMVK EASAVAELGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSHSP SSTPALPSKI  120
TNLLLQRLKA RNNANSCSSP SSAPLPIINH QHDNNLHEQA AKTELSETYT DFLNDPEDYY  180
ITSSNNHDII TDHISASSID YMTSSLESCL TNKETDHIEY GNLSELVQQT YSCGDANFAA  240
EGSEEDVDPE QEQEEEMNGD QVGVIDFQFV DDIGASNSNC YSPSPFEIAE EIEEPVLEAE  300
SYTDEPSMLR AAMKRMKYER KFSASLYAFN GIPECLKLRI GSVNGNGKGR GVSECLSNLQ  360
RACGNKKEEE VVVTVGAAGE HQRNDSKQEE QGSSMDVSLS GDGELSLWSS LDLPPICFLS  420
TN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-23ERF family protein