PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003987.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 93aa    MW: 10492.9 Da    PI: 7.6844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003987.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-0720591554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +i++   +L+ llP++ + ++  +s ++iLe+++ YIk L
  PCP003987.1 20 EIKELVLKLQPLLPQLHHSRNAPVSASSILEETCSYIKRL 59
                 68888889999****889********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSSRRSSSSS SRASKPSDDE IKELVLKLQP LLPQLHHSRN APVSASSILE ETCSYIKRLH  60
REVEDLSKRL SQLLDSAGIT DVDEELIRTL LRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-14bHLH family protein