PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004011.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 236aa    MW: 25817.7 Da    PI: 4.9609
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-182373155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  PCP004011.1 23 PVYRGVRMRT-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALTIKG 73
                 68*****998.**********854...59*********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSNSPDPDQK RAKRARETSS KHPVYRGVRM RTWGKWVSEI REPRKKNRIW LGTFSTPEMA  60
ARAHDVAALT IKGNSAILNF PGLVGLLPRP DSNSPRDIQA AAFKAASMET LNAPPPPPSQ  120
SSSSSSSALS QSSPSSSMVA ATSTSEDAGT PEELGEIVEL PSLGTSYESA QSGSELVFAD  180
SVEGWLYPPP WWHNSYFEED YGYNSLINSI IRDDQMLMPE PPAAECVEVE ASLWHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-66ERF family protein