PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004012.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 248aa    MW: 27868.4 Da    PI: 8.5874
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.55.1e-13126221187
                  EEEE-..-HHHHT.T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SS CS
           B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgr 87 
                  f+k++t  dv+ + +rl+l k+ ++++         +   +e++ +t++d++g  +e++l+ ++++ r++ ++GWk+F ka+gL   +Df+++ + ++
  PCP004012.1 126 FEKQMTETDVNHLyQRLILYKNDVKRYlspllnekeD--LKEGVNVTVYDTDGVDYEIELSTWNSGTRVLAGEGWKNFRKAHGLMaYRDFLTLWMFRN 221
                  99********999999**************9988533..44889****************************************96689999876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MTNRTTRKRS ARRTPSSSGT ANQPQNPPEA TEVVEALLGL TSGQIPSGLG TANQPQNSPQ  60
GIQCAQILYS FKQEALQNQE GGGGGGEEEV EQRSFYGIGN YVPSRLPPLP NHLLGLIQGQ  120
QCSNPFEKQM TETDVNHLYQ RLILYKNDVK RYLSPLLNEK EDLKEGVNVT VYDTDGVDYE  180
IELSTWNSGT RVLAGEGWKN FRKAHGLMAY RDFLTLWMFR NADTTKLCMF ISCRRLPVVQ  240
TIQRQGRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.13e-20B3 family protein