PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004092.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 168aa MW: 19733.5 Da PI: 7.1627

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004092.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.8	1.4e-11	54	159	3	94
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS..............-EEEEEE..EEETTEEEE-TTHH.HHHHHHT- CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg..............rsWevkliyrkksgryvltkGWk.eFvkangL 74 k l sd ++++rl +pk+ +++h + d++ + ++k+ +++++ y+l +GW+ eFv gL PCP004092.1 54 KRLAASDLGELSRLLMPKEAVRKHvmsylddklakM-----------VDSKEglpvtvvdwdtcnrHELTFKH--WNSGDFYILNGGWRpEFVVRRGL 138 77889*****************776655555541...........44333355555555558667777777..*********879*** PP -TT-EEEEEE-SS.SEE..EE CS B3 75 kegDfvvFkldgr.sefelvv 94 ke+D + ++ld++ ++ ++ + PCP004092.1 139 KENDEIGLYLDWDwKTSKYIF 159 *********9988777666 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MKLEEEDHHP SKVRLFGIGL GSSLNDLRGG HELSTDLYLW DPTWDYSSIW KIRKRLAASD 60 LGELSRLLMP KEAVRKHVMS YLDDKLAKMV DSKEGLPVTV VDWDTCNRHE LTFKHWNSGD 120 FYILNGGWRP EFVVRRGLKE NDEIGLYLDW DWKTSKYIFT FSVLQRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33720.1	1e-17	B3 family protein