PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004094.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 168aa MW: 19358.1 Da PI: 7.1437

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004094.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.4	5.3e-13	54	160	3	95
EE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHH.HHHHHHT--TT-EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg...rsWevkliyrkksgryvltkGWk.eFvkangLkegDfvvFk 83 k l sd ++++rl +pk+ a++h ++k+ +t+ d++ + ++k+ +++++ yvl +GW+ +Fv gLke+D + ++ PCP004094.1 54 KRLAASDLGELSRLLMPKEAARKHvmsylddklakmvDSKEGL--PVTVVDRDTcnlHELTFKH--WNSGDFYVLNGGWRpKFVVRRGLKENDEIGLY 147 77899*****************9999888888865544444..4666677668789999999..*********878************ PP E-SS.SEE..EEE CS B3 84 ldgr.sefelvvk 95 ld++ +++++ +k PCP004094.1 148 LDWDwKTANYIFK 160 *9999988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MKLEEEDHHP SKVRLFGVGL GSSLNDPCGG HEPSTDLYLW DPTWDYSSIW KIKKRLAASD 60 LGELSRLLMP KEAARKHVMS YLDDKLAKMV DSKEGLPVTV VDRDTCNLHE LTFKHWNSGD 120 FYVLNGGWRP KFVVRRGLKE NDEIGLYLDW DWKTANYIFK FSVLQGAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33720.1	3e-17	B3 family protein