PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004132.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 230aa    MW: 26500.2 Da    PI: 7.3454
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004132.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR193.52.6e-2969157189
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                  ++Y++YA++vGF++r+ + ++s+r+g+i +r+f C+keg+r+++++k+ + rr+r+etr gCka+++v+kek+gkw+vtkle++H H++
  PCP004132.1  69 EYYDAYATRVGFRIRVGNFHRSNRDGSINSRKFLCNKEGFRDNKQSKRGEVRRPREETREGCKAMIMVRKEKSGKWVVTKLETKHCHPM 157
                  69*************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAADPTPMES EADLNRMVVE SPVERDILNT ESGEMLDSNN GTDLKENEVD GILEPYVGME  60
FDSEEAVKEY YDAYATRVGF RIRVGNFHRS NRDGSINSRK FLCNKEGFRD NKQSKRGEVR  120
RPREETREGC KAMIMVRKEK SGKWVVTKLE TKHCHPMWLS RGKRVTILAP SQDEKDKKIR  180
ELSAELYRAN QQLAECRKTL EMVLKEAQKS LSALELVEWL ERIRPCIVGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.17e-50FAR1 family protein