PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004157.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 96aa    MW: 10645.8 Da    PI: 7.8461
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004157.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73.1e-091356344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT+   +l+ +a + + ++   +W+ +a+ +g g+t +++k ++
      PCP004157.1 13 TWTPKQNKLFEKALAVYDKDtqdRWHNVAEAVG-GKTVEEVKRHY 56
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASVSSSRNL SSTWTPKQNK LFEKALAVYD KDTQDRWHNV AEAVGGKTVE EVKRHYEILV  60
HDLMHIESGQ VPIPNYKAAG SSGSNGSNRG FGDEQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.29e-39MYB_related family protein