PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004165.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 2671aa MW: 305308 Da PI: 9.9617

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004165.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.6	3.3e-14	2360	2407	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl PCP004165.1 2360 KGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 2407 678*******************************************97 PP
2	Myb_DNA-binding	46.6	8.1e-15	2413	2456	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++ + lG++ W+ Ia++++ gRt++++k++w++ PCP004165.1 2413 RGAFSPQEEELIIHFHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 2456 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 2671 aa Download sequence
MRRKRRVPEV LRRLFGKRAR TLSATIVSLL PPHSASSVPD DCRFCKGRRC LSCTAPDGLS 60 FLLRPDDPSD YRHLLNHGYV VFAKNTPAVT RFSPDSHWSQ IEIVRAVIEA MMVEQPVSSN 120 VIYSGYDKSN QSSGIVELLT SSAWCLLLER VGDGIMVYLL RNASIFFPLL RTNHQQVTGP 180 PISKLCPKKL KCAPQPQWQQ SLPESYVPSL PIQSTPLSVV PIMRKKMRRK CRVPEVLRRL 240 FGKRARTLSD TIVSLLPPHY SSSVPDDCRF CKGRRCLSCT APDGLSFLLR PDDPSDYRHL 300 LNHGYVAFAK NTPAVTRFSP DSHWSQIEIV RAVIEAMMVE QPVSSNVICS GYDKSNQSSG 360 IVELLTSSAW CLLLERVGDG IMVYLLRNAS IFLPLLRTNH QQVTGLPISK LCPKKLKRAP 420 QPLWQQSLPE SYGPRKKRER EDNVHSLLKR QHLSSFSSDK TVGSAACCGC CSVCKDKHCH 480 NGTSTFTNIY EGDLNKELEQ GSQRLKKRAR PFSWQRRKKR RLLPSQETNF QDPSKTIIGD 540 KESLSSRLSY SSVHHHKKCS CLGLRIPRKV AKGAQIDRKF IFFNLEQSSS VFPRKRPRKK 600 REREDNVHSL LKRQHLSSFS SDKTIGSAAC SGCCSVCKDK HSHNGTSTFT DRYEGDLNKE 660 LEQGSQRLKK RARPFSWQRR KKHRLLPSQE TSFQDLSKTI IGDKESLSSR LSYCSVHHHK 720 KCSCLGLRIP RKVAKGAQID RKFMFFNLEQ SSSVFPRKHV LNSLKPNSVG SEFLVKSIFG 780 ISDTEGAMSK ICPRGSGLCL MGSACLYHSL VKLLKTLIRR AQHCHSLRLL DKHCGVSSPD 840 ATDSHSEAIK SYCLKSQVVS FMWAVCKRII PSDLLGTASN WRILRRNISK FIHLRRFENF 900 SLRQCMHKLK TSRFPFLSNK QYFCSMNNEA LKDMGGKGLD IHKGFPRLND AAHIVKQKVL 960 KSWIYWFFSS IIVPLLQANF YITESEHGRQ DVYYYRKSVW EKVKNKTISC MKDQRYYCLD 1020 DATTRRIIRK RLFGFSKLRI CPKECGVRLL ANLKASSKMP RKEFSLAEQS SGIVRRKKSL 1080 QKRVKFEYFK SVNSVLCDTH AVLKAVRLKE PEKLGSSVFD YNDVYRKLCP FVMGLKNGPT 1140 MMPDVFIVVS DVSKAYDTVD QDKLLCVMKD AIRTDEYFLK HSYEVLCTKE FLWVHENPAL 1200 LDQHTSLRFK SSALHRSLQS VLVNQICPRE SGLCLTGSAC LYHSLVKLLK TLIRRAQHCH 1260 SLRLLDKHCG VSSPDATDSH SEAIKSYCLK SQVVSFIWAV CRRIIPSDLL GTASNWRILR 1320 RNISKFINLR RFENFSLQQC MHKLKTSRFP FLSNKQYFCG MNSEAVKDMG GKGLDIHKGF 1380 PRLNDAAHIV KQKVLKSWIY WFFSSIIVPL LQANFYITES EHGRQDVYYY RKSVWEKVKN 1440 KTISCMKDQR YYCLDDATTR RIIRKRLFGF SKLRICPKEC GVRLLANLKA SSKMPRKEFS 1500 LAEQSSGIVR RKKSLQKGVK FEYFKSVNSV LRDTHAVLKA IRLKEPEKLG SSVFDYNDVY 1560 RKLCPFVMGL KNVPTMMPDV FIVVSDVSKA YDTVDQDKLL CVMKDAIRTD EYFLKHSYEV 1620 LCTKEFLWVH ENPALLDQHA SLRFKSSALH RSLQSVHFNQ EYSRSMKKEE LFFNLYQHVK 1680 RNVLQLDKKF YLQGVGIPQG SVLSSLLCSL YYGHLDRNVI FPFLEKIWEP ATIDSSRGHN 1740 FGDASAAQSA NEDGIASSST YILLRFIDDF LFISTSRNQA AGFFTRLQRG FRDYNCYMNE 1800 KKFCVNFDIQ HMPGIPSSRV YLGEDGISFI RWSGLLLNSC TLEVQADYTK YWNNHLRSTL 1860 TVSWQDQPGR HLKKKLCDYM KPKCHPIFFD SNINSASVVR LNIYQAFLLC AMKFHCYVRD 1920 LSYVWKLRPR SYANIIKRSL RYMHVLIKRR MRSVHADFHP ILQLEKGEVE WLGLYAYIQV 1980 LKRKQSRHKE LISLLTSKLL KHTISGSVSS QLSSPSSQLQ YLNSSLFLLY LPMSGTALEQ 2040 GRSIQEFFYH AREEGSEDSA VIALCFSCFT ETGLVLLNFA LESIISCPFY CVDRIHSSDY 2100 IFHKVCYVEV PLVLFGGSGN YASALYIAAV KANALEKVES EILAIVEAMK KSPTFSQFTR 2160 DLSVPADTRV KAIDQIAAEA KFSEITKNFL VVLAQNGRLR NLETISKRFG ELTMAHKGEV 2220 KAIVTSVIPL PAEEEKELKE TLQELIGQGK KVILEQKIDP SILGGLVIEF DKKVFDMSIK 2280 TRARQMERFL WPVGQVQGVR VNIMDDEISI HHINYFNQKN AKKASPLAIT MRKPESIGKD 2340 DVDGAKTINK KKMMMSKLRK GLWSPEEDEK LMRYMLTNGQ GCWSDIARNA GLQRCGKSCR 2400 LRWINYLRPD LKRGAFSPQE EELIIHFHSI LGNRWSQIAA RLPGRTDNEI KNFWNSALKK 2460 RLKNNNMSTS TSSPNDSDSS DPRDPVVGGT FMPMHDHDMM TMYNMDSSSS STTSMQAMAV 2520 NSNTLFNPFY MLDNRYDMAH ADDVVVNPTC FPHLPNTGDN QGHYGDYGNL EGGHKMGLEG 2580 DLFLPPLESR SIKNNLNGQL VADNISKKNS SISNYHFHNS CFNNTELIGF KVDEEEDMFG 2640 FGNINGGQGE SVRVGEWDFE GFMLDTSSFL S

Sequence ? help Back to Top

Protein Sequence Length: 2671 aa Download sequence

MRRKRRVPEV LRRLFGKRAR TLSATIVSLL PPHSASSVPD DCRFCKGRRC LSCTAPDGLS  60
FLLRPDDPSD YRHLLNHGYV VFAKNTPAVT RFSPDSHWSQ IEIVRAVIEA MMVEQPVSSN  120
VIYSGYDKSN QSSGIVELLT SSAWCLLLER VGDGIMVYLL RNASIFFPLL RTNHQQVTGP  180
PISKLCPKKL KCAPQPQWQQ SLPESYVPSL PIQSTPLSVV PIMRKKMRRK CRVPEVLRRL  240
FGKRARTLSD TIVSLLPPHY SSSVPDDCRF CKGRRCLSCT APDGLSFLLR PDDPSDYRHL  300
LNHGYVAFAK NTPAVTRFSP DSHWSQIEIV RAVIEAMMVE QPVSSNVICS GYDKSNQSSG  360
IVELLTSSAW CLLLERVGDG IMVYLLRNAS IFLPLLRTNH QQVTGLPISK LCPKKLKRAP  420
QPLWQQSLPE SYGPRKKRER EDNVHSLLKR QHLSSFSSDK TVGSAACCGC CSVCKDKHCH  480
NGTSTFTNIY EGDLNKELEQ GSQRLKKRAR PFSWQRRKKR RLLPSQETNF QDPSKTIIGD  540
KESLSSRLSY SSVHHHKKCS CLGLRIPRKV AKGAQIDRKF IFFNLEQSSS VFPRKRPRKK  600
REREDNVHSL LKRQHLSSFS SDKTIGSAAC SGCCSVCKDK HSHNGTSTFT DRYEGDLNKE  660
LEQGSQRLKK RARPFSWQRR KKHRLLPSQE TSFQDLSKTI IGDKESLSSR LSYCSVHHHK  720
KCSCLGLRIP RKVAKGAQID RKFMFFNLEQ SSSVFPRKHV LNSLKPNSVG SEFLVKSIFG  780
ISDTEGAMSK ICPRGSGLCL MGSACLYHSL VKLLKTLIRR AQHCHSLRLL DKHCGVSSPD  840
ATDSHSEAIK SYCLKSQVVS FMWAVCKRII PSDLLGTASN WRILRRNISK FIHLRRFENF  900
SLRQCMHKLK TSRFPFLSNK QYFCSMNNEA LKDMGGKGLD IHKGFPRLND AAHIVKQKVL  960
KSWIYWFFSS IIVPLLQANF YITESEHGRQ DVYYYRKSVW EKVKNKTISC MKDQRYYCLD  1020
DATTRRIIRK RLFGFSKLRI CPKECGVRLL ANLKASSKMP RKEFSLAEQS SGIVRRKKSL  1080
QKRVKFEYFK SVNSVLCDTH AVLKAVRLKE PEKLGSSVFD YNDVYRKLCP FVMGLKNGPT  1140
MMPDVFIVVS DVSKAYDTVD QDKLLCVMKD AIRTDEYFLK HSYEVLCTKE FLWVHENPAL  1200
LDQHTSLRFK SSALHRSLQS VLVNQICPRE SGLCLTGSAC LYHSLVKLLK TLIRRAQHCH  1260
SLRLLDKHCG VSSPDATDSH SEAIKSYCLK SQVVSFIWAV CRRIIPSDLL GTASNWRILR  1320
RNISKFINLR RFENFSLQQC MHKLKTSRFP FLSNKQYFCG MNSEAVKDMG GKGLDIHKGF  1380
PRLNDAAHIV KQKVLKSWIY WFFSSIIVPL LQANFYITES EHGRQDVYYY RKSVWEKVKN  1440
KTISCMKDQR YYCLDDATTR RIIRKRLFGF SKLRICPKEC GVRLLANLKA SSKMPRKEFS  1500
LAEQSSGIVR RKKSLQKGVK FEYFKSVNSV LRDTHAVLKA IRLKEPEKLG SSVFDYNDVY  1560
RKLCPFVMGL KNVPTMMPDV FIVVSDVSKA YDTVDQDKLL CVMKDAIRTD EYFLKHSYEV  1620
LCTKEFLWVH ENPALLDQHA SLRFKSSALH RSLQSVHFNQ EYSRSMKKEE LFFNLYQHVK  1680
RNVLQLDKKF YLQGVGIPQG SVLSSLLCSL YYGHLDRNVI FPFLEKIWEP ATIDSSRGHN  1740
FGDASAAQSA NEDGIASSST YILLRFIDDF LFISTSRNQA AGFFTRLQRG FRDYNCYMNE  1800
KKFCVNFDIQ HMPGIPSSRV YLGEDGISFI RWSGLLLNSC TLEVQADYTK YWNNHLRSTL  1860
TVSWQDQPGR HLKKKLCDYM KPKCHPIFFD SNINSASVVR LNIYQAFLLC AMKFHCYVRD  1920
LSYVWKLRPR SYANIIKRSL RYMHVLIKRR MRSVHADFHP ILQLEKGEVE WLGLYAYIQV  1980
LKRKQSRHKE LISLLTSKLL KHTISGSVSS QLSSPSSQLQ YLNSSLFLLY LPMSGTALEQ  2040
GRSIQEFFYH AREEGSEDSA VIALCFSCFT ETGLVLLNFA LESIISCPFY CVDRIHSSDY  2100
IFHKVCYVEV PLVLFGGSGN YASALYIAAV KANALEKVES EILAIVEAMK KSPTFSQFTR  2160
DLSVPADTRV KAIDQIAAEA KFSEITKNFL VVLAQNGRLR NLETISKRFG ELTMAHKGEV  2220
KAIVTSVIPL PAEEEKELKE TLQELIGQGK KVILEQKIDP SILGGLVIEF DKKVFDMSIK  2280
TRARQMERFL WPVGQVQGVR VNIMDDEISI HHINYFNQKN AKKASPLAIT MRKPESIGKD  2340
DVDGAKTINK KKMMMSKLRK GLWSPEEDEK LMRYMLTNGQ GCWSDIARNA GLQRCGKSCR  2400
LRWINYLRPD LKRGAFSPQE EELIIHFHSI LGNRWSQIAA RLPGRTDNEI KNFWNSALKK  2460
RLKNNNMSTS TSSPNDSDSS DPRDPVVGGT FMPMHDHDMM TMYNMDSSSS STTSMQAMAV  2520
NSNTLFNPFY MLDNRYDMAH ADDVVVNPTC FPHLPNTGDN QGHYGDYGNL EGGHKMGLEG  2580
DLFLPPLESR SIKNNLNGQL VADNISKKNS SISNYHFHNS CFNNTELIGF KVDEEEDMFG  2640
FGNINGGQGE SVRVGEWDFE GFMLDTSSFL S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	506	519	KKRARPFSWQRRKK
2	506	521	KKRARPFSWQRRKKRR
3	515	521	QRRKKRR
4	669	682	KKRARPFSWQRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	4e-66	MYB family protein