PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004262.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 282aa    MW: 32162.1 Da    PI: 4.957
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004262.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18107157155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr+++ +g+W+AeIrdp+    r  r++lg+f taeeA  a+++a+ +++g
  PCP004262.1 107 KKYRGVRQRP-WGKWAAEIRDPK----RgIRVWLGTFETAEEAGMAYDKAAIAFKG 157
                  59********.**********83....46**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDRAKQYTQR RTVKNKLVKK LTTRFRESTA GAPQIVRISV TDDNATDSSS DEAEAEPGRK  60
YRVLVKRVIN EVRIEDPSPS PALVSKPTKP SRCRAAEESN EISPNGKKYR GVRQRPWGKW  120
AAEIRDPKRG IRVWLGTFET AEEAGMAYDK AAIAFKGPLA LTNFLKPPEI AIPDISEEDC  180
NPISQSPLIS QCGHSVRSPT SVLSGREPEI DWKVSERQNF GFFDTEFWLN DCFEPPIFFE  240
EMSVVPETLL KDEDFSDLSL DFRSCNWDDV EDYFQDAYEL KR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-42ERF family protein