PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004416.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 231aa    MW: 26243.5 Da    PI: 7.6947
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004416.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.65e-2964152291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  fYn+YA+++GF +r++ +++sk++g+++ rt+vC+keg+r++++++ +k+ ++ra+tr+gC+a+l +kk + gkw+vt ++ eH+H+l+p
  PCP004416.1  64 FYNAYATRMGFVTRMNDMYRSKHDGTVIGRTLVCNKEGFRKPDRRD-KKTLKPRAQTRVGCRAMLSIKKLSVGKWVVTWFVREHTHALTP 152
                  *******************************************999.99**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MTHESDGASV GTSLVDMSHL FGQDDDDDDD QRTPNSCKDG SSLVQPHEPY VGQEFDSQES  60
ALAFYNAYAT RMGFVTRMND MYRSKHDGTV IGRTLVCNKE GFRKPDRRDK KTLKPRAQTR  120
VGCRAMLSIK KLSVGKWVVT WFVREHTHAL TPNKALKGLV NDQVPDDKTK IAELTNELFL  180
ERKRSAALRE IVDLLFNHIE EHTQDLSKKV QHVVDNVKEL ESEGKNRRSL G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-70FAR1 family protein