PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004554.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SAP
Protein Properties Length: 469aa    MW: 51270.4 Da    PI: 6.3911
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004554.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP730.41.6e-222134672454
          SAP   2 ssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqr 95 
                  sssssss s++++g++g +g + s+    g++egpsssr+ra+nevwpePf+eala+qva++asr++Grlaaa+alanvfqvcstwravsrsdllw++
  PCP004554.1  13 SSSSSSSTSHDGNGDDGANGAGPSNvqrgGDFEGPSSSRRRAVNEVWPEPFVEALAAQVATEASRYAGRLAAAPALANVFQVCSTWRAVSRSDLLWHH 110
                  56666666667777777777776668899********************************************************************* PP

          SAP  96 ltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdr 193
                  lt riW rt l+rdtWr+eyiy+hrta+nfrtrr++++tl+fd +dv++   +d l+Crclalsd +la+GfadGavrlfdl+trlhvst++p+ rdr
  PCP004554.1 111 LTGRIWGRTILIRDTWRDEYIYWHRTATNFRTRRSAHTTLDFDLSDVED---PDGLTCRCLALSDAHLACGFADGAVRLFDLATRLHVSTLRPHLRDR 205
                  ********************************************98887...699******************************************* PP

          SAP 194 lGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPea 291
                  lGrfsrav+Givi++ +l+fatldGdihva i+g     +rra+lGdvvndG+lvdf+Gs+rWwvGlyaGvpGr+fhiWd+ te+l+fvGG+ltdPea
  PCP004554.1 206 LGRFSRAVTGIVITNFTLTFATLDGDIHVADING--PQVTRRAHLGDVVNDGVLVDFTGSERWWVGLYAGVPGRTFHIWDGLTEQLTFVGGTLTDPEA 301
                  *********************************9..679*********************************************************** PP

          SAP 292 vmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrg 388
                  vmGWhmlte+ e+vGrvrvt+retavaCts r++vfdl nqg+vl eee rrG+iv++ d+s +ay++v +rG a+vr  ++ eevcrf+vrg aq  
  PCP004554.1 302 VMGWHMLTEMNESVGRVRVTSRETAVACTSARVIVFDLANQGIVLSEEEYRRGIIVAAADVSRSAYIIVGRRGLASVRWSDTQEEVCRFNVRGaAQMA 399
                  *********************************************************************************************99*** PP

          SAP 389 vlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss...dgtihlldfga 454
                  v+gC+n g al++ ggv+rvWe e+ + ylys+rer+gevnalv d+rhva++s     + +hl+dfga
  PCP004554.1 400 VMGCMNEGCALMCVGGVVRVWEAERGA-YLYSFRERIGEVNALVCDERHVAACSWgsgGTRLHLWDFGA 467
                  *************************77.*************************86544678*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MSTSYSSAPS STSSSSSSST SHDGNGDDGA NGAGPSNVQR GGDFEGPSSS RRRAVNEVWP  60
EPFVEALAAQ VATEASRYAG RLAAAPALAN VFQVCSTWRA VSRSDLLWHH LTGRIWGRTI  120
LIRDTWRDEY IYWHRTATNF RTRRSAHTTL DFDLSDVEDP DGLTCRCLAL SDAHLACGFA  180
DGAVRLFDLA TRLHVSTLRP HLRDRLGRFS RAVTGIVITN FTLTFATLDG DIHVADINGP  240
QVTRRAHLGD VVNDGVLVDF TGSERWWVGL YAGVPGRTFH IWDGLTEQLT FVGGTLTDPE  300
AVMGWHMLTE MNESVGRVRV TSRETAVACT SARVIVFDLA NQGIVLSEEE YRRGIIVAAA  360
DVSRSAYIIV GRRGLASVRW SDTQEEVCRF NVRGAAQMAV MGCMNEGCAL MCVGGVVRVW  420
EAERGAYLYS FRERIGEVNA LVCDERHVAA CSWGSGGTRL HLWDFGAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-179SAP family protein