PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004644.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 243aa    MW: 26443.4 Da    PI: 6.3683
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004644.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-1868118155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PCP004644.1  68 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 118
                  68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAPEPNISEA ESTSNSPSCS SGLLHTRPNS TSNTPNTITK KPSSEQQQQV ILKRKRHDDS  60
KVNSSKHPVY RGVRMRNWGK WVSEIREPRK KSRIWLGTFS TPEMAARAHD VAALSIKGSS  120
AILNFPELTE LLPRPASLKP QDVQAAATKA AAMVHLNSTT SSSSLSSSSS SSSLLLSQSE  180
GSESEELGEI VELPNIEGSF ESPESRNEFI LVKDSLDAWV YPSLGVEGVE LNLWGFFSSD  240
ISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-48ERF family protein