PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004658.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 269aa    MW: 28772.3 Da    PI: 9.0164
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004658.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19135185255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  PCP004658.1 135 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 185
                  8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MYGQSGADSI WRHFLGETDL LIGNPMSNSG SGPIFSRSSS FSSLYPCLTE NWGDLPLKEN  60
DSEDMVLYGV LRDAVSVGWV PSGSADTCSY GFSVKSEPEV LPPVDRVPEK KAAPVQPVQK  120
SAEAVPAAVP AKGKHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTFETAE DAALAYDRAA  180
YRMRGSRALL NFPLRVNSGE PDPVRVTSKR SSSEPSSSSS ENGSPKRRKK ADGSSPVQAG  240
LEMGAGMGQQ QVGGQVAVSV TRGEQLLVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-64ERF family protein