PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004783.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 237aa MW: 25961 Da PI: 8.2701

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004783.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.3e-19	94	144	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g PCP004783.1 94 HFRGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETAEDAGLAYDRAAFKMRG 144 69*****.*******9998..***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSTESFSSSN WAFLESIRQH LLHDDLETQE TFLANVAQLD APLHNSPSTS SSSSAHFVVE 60 GSGNTMGVMN HALETSNKFE LAAGAVQSPF CGRHFRGVRR RPWGKYAAEI RDPKKNGARI 120 WLGTYETAED AGLAYDRAAF KMRGSKAKLN FPHLIGTHDS EPGRVAPKRC SPEPLSSSVS 180 SSDGSGSPML KRRRNVVSSA AKAKLQVADE QLQLNSFSFG SHLLLNELYT FDDLFAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	5e-45	ERF family protein