PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004919.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 145aa MW: 16036.7 Da PI: 7.0972

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004919.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.5	3.1e-05	118	142	7	30
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 ++ ++RR+ri +++ L+el+P+ + PCP004919.1 118 IAAKNRRERISERLKMLQELVPNgC 142 5679******************955 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MTGIGDHSLS GDLNWFQTAS NYSSSIPSTS KEDHGDHEAY GWIYSEATDN FHQSDEQEAG 60 FHKRPITFHL CTTNNGLDIA EICCQGESMQ PSKKQCTSAT KKPKPKSSTS ASKDPQSIAA 120 KNRRERISER LKMLQELVPN GCKVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37800.1	2e-16	bHLH family protein