PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005308.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WOX
Protein Properties Length: 237aa    MW: 27202.6 Da    PI: 8.6824
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005308.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.27.7e-201069357
                 --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 +R+++t+eql  Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  PCP005308.1 10 SRWCPTPEQLMLLEEMYRAgIRTPNASQIQHITAQLsfygKIEGKNVFYWFQNHKARDRQ 69
                 8*****************99*************************************996 PP
2Wus_type_Homeobox117.85e-38870264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +++RW+PtpeQ+++Lee+y++G+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk
        PCP005308.1  8 SSSRWCPTPEQLMLLEEMYRAGIRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNHKARDRQK 70
                       689***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSPAANSSSS RWCPTPEQLM LLEEMYRAGI RTPNASQIQH ITAQLSFYGK IEGKNVFYWF  60
QNHKARDRQK LRRKLCKQLQ QQQLLYHHHN NHDYPNYHYH QQLNQQSFLG YLESPPPASS  120
ALHHPQLSTC HHHDNYSSTG FLPPQVGVED ALINYTWKMT IPEKVEMEKS VMSMHGRDWM  180
MNVGPPSPCC TSSRSTATTS RPPLKTLQLF PTTATNLKEE STPSYNAPSS SIPTENY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-41WOX family protein