PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005321.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 221aa MW: 23516.8 Da PI: 8.0209

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005321.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.3	4.7e-40	16	76	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprC+s+ntkfCyynny+lsqPr+fCk+C+ryWtkGGalrn+PvGgg+rkn k+s PCP005321.1 16 EQEQLKCPRCESSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGALRNIPVGGGSRKNTKKS 76 57899****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MQDPATFQSM KPQFPEQEQL KCPRCESSNT KFCYYNNYNL SQPRHFCKNC KRYWTKGGAL 60 RNIPVGGGSR KNTKKSSSSA SKRSSSSLSS SSAAAAQNPD PQPDRTRVCA PKVDQDRGVM 120 DISGSFSSLL ASNGQFGSLL EGLNPNGSGL KLMQMGDYGE NLDGAGNGLD SDPGLGLEGQ 180 GNGNPESYVG LQNGDSSTSS CWNGGNGWPD LAIYTPGSSF Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21270.1	6e-42	Dof family protein