PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005376.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family BBR-BPC
Protein Properties Length: 1040aa    MW: 115348 Da    PI: 6.8992
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005376.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind357.13.6e-10913111301
    GAGA_bind   1 mdddgsre..rnkg.yye...............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdn 79 
                  mdd  ++e  r+k  yy+               ++ ++l   +++++ms+ia+rda+irern+al+ek++a+a+rd+a+ qrd+ala+r+ al+erdn
  PCP005376.1   1 MDDGRQHEngRHKMdYYRggvaspwnmmtqqqaKEpNALV--MNKKIMSIIADRDAAIRERNAALAEKNEALAARDEALRQRDEALAQRDSALMERDN 96 
                  6776655558999889999999999999987653345666..99****************************************************** PP

    GAGA_bind  80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak.kkkkksekskk 176
                  +++al  ++n+   + p g ++ +g+k ++   + +   l+d  + +++ + +ea+pi+   +ea +++++k+    k++k+++ak + kk +e+ ++
  PCP005376.1  97 AYAALHSRDNA--VNFPLGGGAQRGSKRLQRPSN-HSVTLADVHYSTKDVHVTEAYPISVISPEAVKSRQTKRA---KENKASRAKqSRKKVGEDLNR 188
                  *******9998..5678899999*******8877.789***************************999999944...444444444133444667777 PP

    GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaa 274
                  + ++++   + k+e+++ dl+ln vs+Dest+PvPvCsCtG++rqCYkWGnGGWqS+CCtt +S+yPLP+++++r+aR++grKmS+++f++lL++Laa
  PCP005376.1 189 QASSDG--IKYKSEWDTHDLGLNLVSFDESTMPVPVCSCTGIPRQCYKWGNGGWQSSCCTTHMSMYPLPQMPNKRHARMGGRKMSGSVFTRLLSRLAA 284
                  766666..57**************************************************************************************** PP

    GAGA_bind 275 eGydlsnpvDLkdhWAkHGtnkfvtir 301
                  +G+dls p+DLk++WA+HGtn+++ti+
  PCP005376.1 285 DGHDLSIPLDLKEYWARHGTNRYITIK 311
                  **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1040 aa     Download sequence    
MDDGRQHENG RHKMDYYRGG VASPWNMMTQ QQAKEPNALV MNKKIMSIIA DRDAAIRERN  60
AALAEKNEAL AARDEALRQR DEALAQRDSA LMERDNAYAA LHSRDNAVNF PLGGGAQRGS  120
KRLQRPSNHS VTLADVHYST KDVHVTEAYP ISVISPEAVK SRQTKRAKEN KASRAKQSRK  180
KVGEDLNRQA SSDGIKYKSE WDTHDLGLNL VSFDESTMPV PVCSCTGIPR QCYKWGNGGW  240
QSSCCTTHMS MYPLPQMPNK RHARMGGRKM SGSVFTRLLS RLAADGHDLS IPLDLKEYWA  300
RHGTNRYITI KIFCPDDVGV EVVEVGVDIV AAVAVGGADE VEDDVGVLED GENLENCHES  360
TQSAMDESPT ETAPVAEARN GGSERTPEEL VAKCIAPVKK QFLRPPPFRG LSNDQSDAVP  420
EGKSKASQTS VVKEKKSKRQ LKRERQQAVK SAVGICPEVA KRGDVSRCPY KDKCRFSHDV  480
EAYKAQKPDD IEGECPFMTA QETCPYGLAC RFLGSHKDGV EGGDVIAHRR SSEVNGLTKD  540
VQKLLWKNKM KFPKADAKLK ALGLEGNAKS KIKILEDKED DQIVSNNCDV TDGNGCSELP  600
AEIREEGGLD ETCPDDESRP SKKTRSVIEE EICSGEVDDG GVSAAKEAAE QTSTAPEPEA  660
TVGIVLPESD RSLRLHPREK KLIDFREKLY LAPLTTVGNL PFRRVCKVLG ADITCGEMAM  720
CTNLLQGQAS EWALLRRHSS EDLFGVQICG AYPDTVAHTV ELIDQECQVD FIDINMGCPI  780
DIVVNKGAGS ALLTKPMRMK GIVQAASGTV DCPITIKVRT AYFEGKNRID SLIADMGNWG  840
ASAVTIHGRS RQQRYSKLAD WEYVYQCSRK ASKALPVLGN GDIFSYVDWN KHKAECPELS  900
TCMIARGALI KPWIFTEIKE QRHWDISSGE RLNILKDYVR LGLEHWGSDT KGVETTRRFL  960
LEWLSYTCRY VPVGLLDVIP QRLNWRPPSY YGRDDLETLM ASDSAADWVR ISEMLLGKVP  1020
DGFTFAPKHK SNSYDRAENG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-117BBR-BPC family protein