PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005421.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family BES1
Protein Properties Length: 324aa    MW: 34597.4 Da    PI: 8.5801
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005421.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822202.11.7e-6221451150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r pt kErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc eAGw+ve DGttyrkg+kp e+++++g s+ asp+ss +   
  PCP005421.1   2 TSGTRLPTSKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVELDGTTYRKGCKPVERMDVMGGSTVASPSSSFH--- 96 
                  5899*****************************************************************************************99... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                       +s ++sy++sp sssfpsp+s++ + +++a   sl+p+l++ls++sss+
  PCP005421.1  97 -----PSNCASYNPSPGSSSFPSPTSSSYAANQNAdsRSLIPWLRNLSSASSSA 145
                  .....9******************98776655554559*********9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MTSGTRLPTS KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCDEAG  60
WTVELDGTTY RKGCKPVERM DVMGGSTVAS PSSSFHPSNC ASYNPSPGSS SFPSPTSSSY  120
AANQNADSRS LIPWLRNLSS ASSSASSSKL PNLYIHSGSI SAPVTPPLSS PTARTPRMRT  180
DWDGQSARPG WAAQKYPFLP SSTPPSPGRQ IVPDPEWFAG IPIPHGPTSP TFSLVSSNPF  240
GFKDEVSAGG GSRLWTPGQS GTCSPAIAAG SDHAADIPMS EVISDEFAFG CNTAGLVKAW  300
EGEKIHEDSG SDDLELTLGS SRTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-120BES1 family protein