PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005467.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YA
Protein Properties Length: 245aa    MW: 27309.5 Da    PI: 7.1783
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005467.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54e-32150206158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep++VNaKQy++Il+RRq+Rak+e+e+k   k+rkpylheSRh+hAlrR+Rg+gGrF
  PCP005467.1 150 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKNRKPYLHESRHQHALRRARGCGGRF 206
                  69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MHGTGDLFVL RDLVDFMIFE LFRELHIVLG LFTYNILMIS SVRDHSDNSD SDDQQSHSES  60
QVHSSLPAIG MSHPGVPTPN MQYAVPPQVG TGHAVAQGGY PYPDPYYRSI FAPYETQPYP  120
PQPYVAQPTV HLQLMGIQQA GVPLPSDAVE EPVFVNAKQY HGILRRRQSR AKAESENKAL  180
KNRKPYLHES RHQHALRRAR GCGGRFLNAK KNGNQQDEMT SGDKSQSNIN LNTDKNELAS  240
SDGTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-63NF-YA family protein