PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005564.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 172aa    MW: 19213.4 Da    PI: 8.2916
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005564.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB150.24e-471811797
        NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 mkk lPanakiskdaketvqecvsefisf+t+easdkcqrekrkting+dllwa++tlGfe+yveplkvyl+k+re+egek
  PCP005564.1  1 MKKGLPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGEDLLWAMTTLGFEEYVEPLKVYLHKFREVEGEK 81
                 9*****************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MKKGLPANAK ISKDAKETVQ ECVSEFISFI TGEASDKCQR EKRKTINGED LLWAMTTLGF  60
EEYVEPLKVY LHKFREVEGE KMTGSTNTSA GTGTGMSAGH GRHADRYHRD HEREQRYVHG  120
HGAARDSING MYGVMSTQST TTMMMDHQQH HHHEGHLYGS GGKPSTGHGR PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.19e-53NF-YB family protein