PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005661.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 252aa    MW: 28152.1 Da    PI: 5.1759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005661.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.6e-1790139255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a++ ++g
  PCP005661.1  90 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPIPEMAARAHDVAALTIKG 139
                  69****998.**********843...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEEEQFNFID CEAQTTSSSY SNSTTSQSQK FSKRSSSSNQ LELLVGHQKA ATTLTTNDDD  60
DDDQISKKKA KIKKRINGDG RQQRHPHHPT YRGVRMRQWG KWVSEIREPR KKSRIWLGTF  120
PIPEMAARAH DVAALTIKGS SAVLNFPELA QELPIPASAS PKDIQAAAAK AAALTFPSSS  180
LEQEAEVETE LMSQAVHDSS PHDSSSTSPS TNYNDDMLFD LPDLLLDVGH HSDHGFIFSV  240
PWLDEEPEFL WE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-43ERF family protein