PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005665.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 328aa    MW: 35595.5 Da    PI: 7.1411
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005665.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.9e-1295139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
      PCP005665.1  95 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 139
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYAGS GSGLLPNNPD  60
SPGDTTNDHA AADGYASEDC VPGSSSSRER KKGTPWTEEE HRMFLLGLQK LGKGDWRGIA  120
RNYVISRTPT QVASHAQKYF IRQTNVSRRK RRSSLFDIVA DDSVETQMEP LDFLHGNYPE  180
AETQGNNPLP APPPLDKECE SMDSTNSDGE QAAPNPDSSE SYYPMVYPAY FSPFPIPYPL  240
WPGYTTEPTM MDKHEVLKPT AIHSKSPINV DELVGMSKLS LGEPLGRSGP SSLTLKMVEG  300
SSRQSAFHAN PGSGSSSISS GGSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-129MYB_related family protein