PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005726.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 236aa    MW: 27280.4 Da    PI: 7.6342
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005726.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036150163114
                  EEETTTTEEESSHH CS
      zf-C2H2   1 ykCpdCgksFsrks 14 
                  y+Cp C+ksF++ s
  PCP005726.1 150 YSCPVCSKSFRDMS 163
                  99********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDGGFEPQVS IDDDRSHQKV NSLTEMVSGN FGCAHYRRRC KIRAPCCDQI FDCRHCHNEA  60
KNSLEVDPLD RHDVPRHDVK RIICSLCNKE QDVQQLCIQC GVCMGNYFCS KCKFFDDDFL  120
FDTREDIAVL RCGHTIHLEC VKEMQRHFQY SCPVCSKSFR DMSRVWEKLD EEVAGTPMPL  180
KYLNKMVWIL CNDCGEMSEV NFHILGHKCP KCKSFNTRKT RGGPASCSSR ITAMMR