PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005759.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 291aa    MW: 32970.5 Da    PI: 5.0402
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005759.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding64.81.7e-203783248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g+WT+eEd +l+d+v+++G g+W++ ar+ g++Rt+k+c++rw++yl
      PCP005759.1 37 GPWTAEEDSILIDYVNLHGEGRWNSLARHAGLKRTGKSCRLRWLNYL 83
                     89*******************************************97 PP
2Myb_DNA-binding45.12.4e-1489132146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++++++++  +G++ W++Ia++++ gRt++++k++w++
      PCP005759.1  89 RGNITLQEQLIILQLHSSWGNR-WSKIAEYLP-GRTDNEIKNFWRT 132
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDISNVHDQM KSAGYGSLEA AAAPDQPIEE GLGLRTGPWT AEEDSILIDY VNLHGEGRWN  60
SLARHAGLKR TGKSCRLRWL NYLRPSVRRG NITLQEQLII LQLHSSWGNR WSKIAEYLPG  120
RTDNEIKNFW RTRVQKQAKQ LKCDVNSKQF QDAMRYVWIP RLIERIGALP ESLADQPRTC  180
TTTTSEFECQ YWVDTNFVPK TSGNTSSDSY DLVQACSIPT DRTSSGDEFM TYPCSGQYGS  240
ENGSGYSQNG INSDIHGFKQ SDYCSTGGDT SVENLWNEEN IWFLQQQLSD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.15e-75MYB family protein