PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005779.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 446aa MW: 47875.9 Da PI: 6.5189

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005779.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2e-20	231	280	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g PCP005779.1 231 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 280 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MCLLKVANQR SSGGGGQYDR FDSPNDASDV DANINNINYG GGLELPPPYQ QQEGQQHVSP 60 STPTMFLGYG RAATEMSAMV SALTHVVSGQ RGSDSWGHIG GGGVTSSLGQ LYSSASSSSA 120 SPLSAAFPSS ASGSHYWVGQ KRGREEDFAS ASAQSQFMES GNRAFRGGYR DYRGTQSESS 180 SGGATATEET TNFATAPTTT TATVSATTAV PTTPSSAESV SFGETGERRR RYRGVRQRPW 240 GKWAAEIRDP HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN VRLIQPPAAV 300 QTFNSNSRPT QSAQPLQPPP PPPQPPQQQL YHPQQAFHPS SDPIRDYFDY SQLLQNSADS 360 NLLEQMYYYN SQLASLQSSL LQPTTSSTPS SALPSSASSS SFPLFFSEQN QQQGFFLQPQ 420 DPNQGGSSDF QAPSWSHSSN NPSSSG

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MCLLKVANQR SSGGGGQYDR FDSPNDASDV DANINNINYG GGLELPPPYQ QQEGQQHVSP  60
STPTMFLGYG RAATEMSAMV SALTHVVSGQ RGSDSWGHIG GGGVTSSLGQ LYSSASSSSA  120
SPLSAAFPSS ASGSHYWVGQ KRGREEDFAS ASAQSQFMES GNRAFRGGYR DYRGTQSESS  180
SGGATATEET TNFATAPTTT TATVSATTAV PTTPSSAESV SFGETGERRR RYRGVRQRPW  240
GKWAAEIRDP HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN VRLIQPPAAV  300
QTFNSNSRPT QSAQPLQPPP PPPQPPQQQL YHPQQAFHPS SDPIRDYFDY SQLLQNSADS  360
NLLEQMYYYN SQLASLQSSL LQPTTSSTPS SALPSSASSS SFPLFFSEQN QQQGFFLQPQ  420
DPNQGGSSDF QAPSWSHSSN NPSSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	232	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	8e-17	ERF family protein