PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005963.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 177aa    MW: 19037.1 Da    PI: 6.5102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005963.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.4e-151967254
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                 + kGVr++k +g+Wv+eIr+p +   r r +lg+f tae Aa a++    +l+
  PCP005963.1 19 KLKGVRQRK-WGKWVSEIRVPGT---RDRLWLGTFSTAEAAAVARDVGYYCLR 67
                 679*****9.**********943...5*****************998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSYSSEESGS TPCSTSNRKL KGVRQRKWGK WVSEIRVPGT RDRLWLGTFS TAEAAAVARD  60
VGYYCLRRPS KLEGLNFPLM LPSCVRDDMS PRSVQKAASD VGMAVDAQLI ANKSPPQQPA  120
GTGSNAVETT EFWENGYVGE TSTSTSTSMS SWGGGHGFGN GGDHQGCLSI SVEDYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-45ERF family protein