PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006004.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WOX
Protein Properties Length: 245aa    MW: 28110.9 Da    PI: 9.1863
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.13.5e-191271357
                 --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 +R+++ +eql  Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  PCP006004.1 12 SRWCPAPEQLMLLEEMYKAgVRTPNASQIQRITAQLsfygKIEGKNVFYWFQNHKARDRQ 71
                 8*****************99*************************************996 PP
2Wus_type_Homeobox116.61.1e-371072264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +++RW+P peQ+++Lee+yk+G+rtPn+++iqrita+L+ yGkie+kNVfyWFQN+kaR+rqk
        PCP006004.1 10 SSSRWCPAPEQLMLLEEMYKAGVRTPNASQIQRITAQLSFYGKIEGKNVFYWFQNHKARDRQK 72
                       689***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSRAANSSSS SSRWCPAPEQ LMLLEEMYKA GVRTPNASQI QRITAQLSFY GKIEGKNVFY  60
WFQNHKARDR QKLRKKLCKQ LQQQQLLYHH HNYHNYRNCH YEQQLNQQTF LGCLESPPPV  120
PSALHHKRLS TCHHHNNYSS TGFLPPQVGV EDALINYTWK MEIPEKVERE KSVMSMYGRE  180
WMIMMMNVSP PSPCCTSSSS STTTTTTSTP PLKTLQLFPI TATDLKEEST PSRSALSSST  240
LTENH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.17e-32WOX family protein