PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006038.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 298aa    MW: 31647.6 Da    PI: 6.6387
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006038.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-09147191554
                  HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  h+++Er RR+ri +++  L+el+P+ +      K + a++L + ++Y+k L
  PCP006038.1 147 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIMDYVKFL 191
                  99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MANNPSEAQA DDFLEQILGL QNFASADANL ARSDGGLAGG QVSQASMMLQ LNSGNGSGHI  60
GGGGGGFHGG VFPLGLSLEQ GKAGFLKHEE ASGSGKRFQD DVVDSRGSSV KNVFHGQPIS  120
NTVAAAPHPP AMRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP SVNKTDRAAM  180
LDEIMDYVKF LRLQVKVLSM SRLGGAGAVA PLVTDIPLSS VEEEGGEGGR NQPAWDKWSN  240
DGTERQVAKL MEENVGAAMQ FLQSKALCIM PISLASAIYH TQSPDTSSVV KPEMNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152157RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-104bHLH family protein